Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK
4JH9 Chain:A ((1-138))
MLNGINHLCFSVSNLEDSIEFYEKVLEGELLVRGRKLAYFNICGVWVALNEEIHIPRNEIYQSYTHIAFSVEQKDFESLLQRLEENDVHILKGRERDVRDCESIYFVDPDGHKFEFHSGTLQDRLNYYREDKPHMTFY-
General information:
TITO was launched using:
RESULT:
Template:
4JH9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58791 for 859 contacts (-68.4/contact) +
2D Compatibility (PS) -14664 + (NN) -2640 + (LL) 64
1D Compatibility (HY) -17600 + (ID) 4350
Total energy: -97981.0 ( -114.06 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_4JH9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JH9-query.scw
PDB file :
Tito_Scwrl_4JH9.pdb
: