Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
| 2QK7 Chain:A ((11-278)) | ---------------------------------------AEIIKRTQDITSKRLAICQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDL-----IKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTP--QVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHEKGKGDKSEFEITYGRNMDATYAYVT--RLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSIT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65540 for 2087 contacts (-31.4/contact) +
2D Compatibility (PS) -27580 + (NN) -10874 + (LL) 3024
1D Compatibility (HY) -33200 + (ID) 12850
Total energy: -147020.0 ( -70.45 by residue)
QMean score : 0.370
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