Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKINTTGGQIHGITQDGLDIFLGIPYAEPPVHDNRFKHSTLKTQWSEPIDATEIQPIPPQPDNKLEDFFSSQSTTFTE----HEDCLYLNIWKQHNDQTKKPVIIYFYGGSFENGHGTAELYQPAHLVQNNDIIVITCNYRLGALGYLDWSYFNKDFHSNNGLSDQINVIKWVHQFIESFGGDANNITLMGQSAGSMSILTLLKIPDIEPYFHKVVLLSGALRLDTLK-SARNKAQYFQKMMRDYLDTDDVTSLSTDDILMLMAKLKQSRGPS-------KGLDLIYAPIKTD-YIQNDYPTTKPIFACYTKDEGDIYITSEQKKLSPQRFIDIME-LNDIPL--KYEDV--QTAKQQSLAITHCYFKQPMKQFLQHLNIQDSNAQLWLAEFAWHDTSSAHYRSAYHILDMVFWFGNLQILAAHQYPTTAHLKFLSRQMQNDLANFAKSG-----KMPWPMYHNERRYYRTYQ |
| 1QE3 Chain:A ((6-460)) | --VTTQYGKVKGTTENGVHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGPICPQPS----------------LPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFFTPDSDVHSQETLDAALEYLLGKPLAEKAADLYPRSLESQIHMMTDLLFWRPA---VAYASAQSHYAPVWMYRFDWH-PEKPPYNKAFHALELPFVFGNLDGL------ITDEVKQLSHTIQSAWITFAKTGNPSTEAVNWPAYHEETR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200402 for 3574 contacts (-56.1/contact) +
2D Compatibility (PS) -44892 + (NN) -27471 + (LL) 2344
1D Compatibility (HY) -24000 + (ID) 7200
Total energy: -301621.0 ( -84.39 by residue)
QMean score : 0.457
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