Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAINIIEYNRSYKEELIEFILSIQKNEFNIKIDRDDQPDLENIEHNYLNSGGQFWLAINNHQNIVGTIGLIRLDNNMSALKKMFVDKGYRN--LKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFREIKRGDLPSSFPKLDVDNRFYYRNLKD
2Q7B Chain:A ((26-180))
------ENNPYHLAQLVDLINYCQNIEAKLDIKMAEQDDIFQIENYYQNRKGQFWIALEN-EKVVGSIALLRIDDKTAVLKKFFTYPKYRGNPVRLGRKLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPDRDSRIYVKLL--
General information:
TITO was launched using:
RESULT:
Template:
2Q7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60838 for 1101 contacts (-55.3/contact) +
2D Compatibility (PS) -16327 + (NN) -8463 + (LL) 916
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -100462.0 ( -91.25 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_2Q7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q7B-query.scw
PDB file :
Tito_Scwrl_2Q7B.pdb
: