Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQYAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHTFPGRIYLSVDAYGEDIKVNGWEEDTELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASL---NVHAAIIGKAAHQASFWEGLE
2X30 Chain:A ((4-230))
-LELLPAVDVRDGQAVRLVHGESGTETSYGSPLEAALAW--QRSGAEWLHLVDLDAAFGTGDNRA-LIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGNGWTRDGG-DLYETLDRLNKEGCARYVVTDIA-------PNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAF-----
General information:
TITO was launched using:
RESULT:
Template:
2X30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126653 for 1827 contacts (-69.3/contact) +
2D Compatibility (PS) -23296 + (NN) -7149 + (LL) 628
1D Compatibility (HY) -14800 + (ID) 3200
Total energy: -174470.0 ( -95.50 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_2X30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X30-query.scw
PDB file :
Tito_Scwrl_2X30.pdb
: