Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKTIYFICTGNSCRSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLAIEKFKLR
2CD7 Chain:A ((1-131))
MDKKTIYFICTGNSCRSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNQTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLAIEKFKLR
General information:
TITO was launched using:
RESULT:
Template:
2CD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57284 for 1091 contacts (-52.5/contact) +
2D Compatibility (PS) -14363 + (NN) -7935 + (LL) 0
1D Compatibility (HY) -17600 + (ID) 6500
Total energy: -103682.0 ( -95.03 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_2CD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CD7-query.scw
PDB file :
Tito_Scwrl_2CD7.pdb
: