Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRFFLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMRILGLEKKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLFAVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMHLMLQAPTPQDYVIATGKTTSVRDFVKMSFEFIGIDLEFQNTGIKEIGLIKSVDEKRANALQLNLSHLKTGKIVVRIDEHYFRPTEVDLLLGDPTGAEKELGWVREYDLKELVKDMLEYDLKECQKNLYLQDGGYTLRNFYE |
1T2A Chain:A ((26-370)) | ----VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLY---------NMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCK-----------------ETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTN--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159399 for 2969 contacts (-53.7/contact) +
2D Compatibility (PS) -35149 + (NN) -9336 + (LL) 3108
1D Compatibility (HY) -34400 + (ID) 10000
Total energy: -245176.0 ( -82.58 by residue)
QMean score : 0.478
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