Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIKNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSSKDASTKKEAQYIPKGFFDPYSSNLNHWDSTF
3JWS Chain:A ((22-78))
------------LKSTLETGCTEHICMGSIMLP---------TKDQLFPLAKEFLDQYYSSIKRFGSKA
General information:
TITO was launched using:
RESULT:
Template:
3JWS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2265 for 175 contacts (12.9/contact) +
2D Compatibility (PS) -4533 + (NN) 2429 + (LL) 916
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -2023.0 ( -11.56 by residue)
QMean score : 0.005
(partial model without unconserved sides chains):
PDB file :
Tito_3JWS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JWS-query.scw
PDB file :
Tito_Scwrl_3JWS.pdb
: