Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKEKSLELPLGHPLVEKLCELSLNNKAAFNEKSEPNFKDEVSEEDKIKFKQALRVFHAIVNNETSLRYLSDENQKFLEDLAQAKKITNEQIEKTLEIVSDSDVDVDFEKLKKLMLNVDSVAVGLKSYSQNQLLDLDGGHWDL
4WKR Chain:A ((55-106))
-------------------------------------------------------------------------------------RFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVE-LDLEGTRIRR
General information:
TITO was launched using:
RESULT:
Template:
4WKR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1864 for 255 contacts (-7.3/contact) +
2D Compatibility (PS) -5300 + (NN) -1904 + (LL) 6564
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -5454.0 ( -21.39 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_4WKR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WKR-query.scw
PDB file :
Tito_Scwrl_4WKR.pdb
: