Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQTKEEWGGFDELEIRYSDKALANTNTLD----------IKDTQMISIALEEVEEVEVKVCCVDSQSIKVGLFKDGQLIYESEVEKL
2J0M Chain:A ((85-147))
LAHPPEEWKY--ELRIRYLPKGFLNQFTEDKPTLNFFYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLE
General information:
TITO was launched using:
RESULT:
Template:
2J0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4969 for 205 contacts (24.2/contact) +
2D Compatibility (PS) -5192 + (NN) -178 + (LL) 56
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -5295.0 ( -25.83 by residue)
QMean score : 0.099
(partial model without unconserved sides chains):
PDB file :
Tito_2J0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J0M-query.scw
PDB file :
Tito_Scwrl_2J0M.pdb
: