Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMTKNAYAFVVIEKSIMVFKCAKDKGLIPITEGFVPLKEGFLRSFKERCNLDFLENLDLLFLYDYQFPS-EVFSLCKDLKNSIWDRKLVVVLVEALEGFKGLNLSLKIEDRHSNSLGNGVQKLLTNADLGSNHKPIVIDSMKTYHQSQQEKYKRERGETLEVRPTTPPSYGGGSIRISGDKKPDSNEENF
1W25 Chain:A ((48-86))
-----------------------------------------------------------IILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRP
General information:
TITO was launched using:
RESULT:
Template:
1W25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22782 for 181 contacts (-125.9/contact) +
2D Compatibility (PS) -4136 + (NN) -2760 + (LL) 4820
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -30358.0 ( -167.72 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1W25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W25-query.scw
PDB file :
Tito_Scwrl_1W25.pdb
: