Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEISEWLQKLDDALDKVVAKKEPESFLKPIISPIEDYQKSVRQIQAQFTDAPKFNEEGAYPQFLSCGLLQVRGKNGANMEFLLPKVYPFPPKSLYIEHEKDGQFLREMLMRLLSSAPLVQLEVILIDALSLGGIFNLARRLLDKNNDFIYQQRILTESKEIEEALKHLHEYLKVNLQEKLAGFRDFVHYNENAKDSLPLKALFLSGVDALSKDALYYLEKIMRFGSKNGVLSFVNLESEKNNQSAEDLKRYAEFFKDRTSFECLKYLNVEIISDQGIKSQHMQDFADKIKAYYKQKKEVKRELKDLQRDKEFWTKSSQHEVSVPV--GWDINHKEVCFKIGNEQNHTLICDHSGSGKSNFLHVLIQNLAFYYDPDEVQLFLLDYKEGVEFNAYVADPALEHARLVSVASSISYGITFLKWLCDEMQKRADRFKQFNVKDLSDYRKHEK----------------------------MPRLIVVIDEFQVLFSDNKSTKAVEGHLNTLLKKGRSYGVHLVLATQTMRGTDINPSFKAQIANRIALPMDAEDSSSVLGDDAACEIQKPEGIFNNNGGNRKYHTKMSVPKAPDDFKSFLTKIHAEFNQRNLAPIDRKIYNGETPLKMPDTLKANEMRLHLGKKVDYEQKDLIVEFESNESHLLVVIQDLNARIALMKLLFQNVKSANKELVFCNKEKRLIRSFDAQKEYGITPVENILSVLDTAMNPNSALVIDNLNEAKELHDKVGAEKLKSFLEKAIDNEQYCVIFAHDFRQIKTNYHFDKLKELLNNHFKQCLAFRCNGENLNAIKSDLPPPSKLNVLLIELSKDSVTEFRPFSL |
2IUU Chain:A ((189-425)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EHKSTVPLALGHDIGGRPIITDLA-KMPHLLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDPKM-LELSIYEGIPHL----LCPVVTDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLTDPLFRRESPDDEPPQLSTLPTIVVVVDEFADMM--MIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQGGAEQLLGHGDMLYLPPGTGLPIRVHGAFVSDDEVHRVVEAWKLRGAPDYIEDILA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172171 for 1686 contacts (-102.1/contact) +
2D Compatibility (PS) -22163 + (NN) -9971 + (LL) 39628
1D Compatibility (HY) -14400 + (ID) 3050
Total energy: -182127.0 ( -108.02 by residue)
QMean score : 0.446
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