Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTYAQESKLRLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIMLLAVSPGLMKGDAQDMQLNIGPNCKLRITSQSFEKIHNTEDGFASRDMHIVVGENAFLDFAPFPLIPFENAHFKGNTTISLRSSSQLLYSEIIVAGRVARNELFKFNRLHTKISILQDEKPIYYDNTILDPKTTNMNNMCMFDGYTHYLNLVLVNCPIELSGARELIEESEGVDGAVSKIASSHLCLKALAKGSEPLLHLREKIARLVTQTTTQKV
4HI0 Chain:B ((6-260))
-----QESKLRLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIMLLAVSPGMMRGDAQDVQLNIGPNCKLRITSQSFEKIHNTEDGFASRDMHIVVGENAFLDFAPFPLIPFENAHFKGNTTISLRSSSQLLYSEIIVAGRVARNELFKFNRLHTKISILQDEKPIYYDNTILDPKTTDLNNMCMFDGYTHYLNLVLVNCPIELSGVRECIEESEGVDGAVSETASSHLCVKALAKGSEPLLHLREKIARLVTQT-----
General information:
TITO was launched using:
RESULT:
Template:
4HI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164802 for 2078 contacts (-79.3/contact) +
2D Compatibility (PS) -27335 + (NN) -2386 + (LL) 896
1D Compatibility (HY) -36400 + (ID) 12250
Total energy: -242277.0 ( -116.59 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4HI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HI0-query.scw
PDB file :
Tito_Scwrl_4HI0.pdb
: