Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIIAHSNEIAHPIFKSADKLFTLYQGDCNEVLPQF-ENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFNY-----QWINNAKKALKNTGSLLISG--TYHNLFSLGRIL-------QKLDFKILNLITWQKTNPPPNFSC-RYLTHSAEQIIW-------------ARKSYKHKHVFNYEILKKIN-----NNKQMRDVWNFPAIAPWEKANGKHPTQKPLALLVRLLLMASDDNSLIGDPFSGSSTTGIAANLLKREFIGIEKESRFIKISMNRKLELDARHQEIRSKIKDLNFQ |
| 1NW8 Chain:A ((46-260)) | --------------------------DCLDTLAKLPDDSVQLIICDPPY---------------NIMPADWD--------DHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLISIISHMRQNSKMLLANLIIW---NYPNGMSAQRFFANRHEEIAWFAKTKKYFFDLDAVREPYDEETKAAYMKDKRLNPESVEKGRNPTNVWRMSRLNGNSLERVGHPTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQRSYEIVEGAANFGAAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62353 for 1156 contacts (-53.9/contact) +
2D Compatibility (PS) -19069 + (NN) -10405 + (LL) 3220
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -100407.0 ( -86.86 by residue)
QMean score : 0.352
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