Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKR--VPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 4JLO Chain:A ((21-103)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------AKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEV-FPKHGNVIFDGFPRTV--KQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQKEDDKPEVIKKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JLO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40678 for 499 contacts (-81.5/contact) +
2D Compatibility (PS) -8541 + (NN) -3089 + (LL) 10992
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -46216.0 ( -92.62 by residue)
QMean score : 0.227
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