Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFKKGVILDAKSVGLKALEVLKEVADFDFYEVTSPNQIVERSIEAEI--MVLNKVVITQEVLSQLPKLKLICITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYSQSDIFTHISDIKMGL--IKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSP--KDKKEE---YERLS-LEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILETKDLYYAS-DVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
| 4LCE Chain:A ((26-315)) | --------LLDGRDCTVE-MPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQS--VEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPL--KDAPNLICTPHAAW-YSEQASIEMREEAAREIRRAITGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153055 for 2117 contacts (-72.3/contact) +
2D Compatibility (PS) -30070 + (NN) -9698 + (LL) 800
1D Compatibility (HY) -22400 + (ID) 5100
Total energy: -219523.0 ( -103.70 by residue)
QMean score : 0.541
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