Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METIEWNEEQRKAFQDLLREFVALIDAKVQEKKQMGKKPKIPKYASCQNGLNKFLAPWGYACKISLGTGLLSHEPSIAFCRQDILGEGFVNGEKPTPTKGFYLWFAYYWRNDLEKIDLCIGRSDEEDKKEECQKCLAYDKIIPNRNECYREL |
3JS8 Chain:A ((366-395)) | ---------RRENVQRVLNEFVTFYQARVQAYQQQGRYPMNGPVEIRVTGLDDPSEAALSGGVAPALSAIRPRPDHPEWNVAVWLDILTLPGTPYANQFYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6433 for 117 contacts (55.0/contact) +
2D Compatibility (PS) -3418 + (NN) -4418 + (LL) 956
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -3847.0 ( -32.88 by residue)
QMean score : 0.719
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