Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRIKVGSDLNKKESLLDAFVKTYLQTLEPISSKRLKELANLKVSCATIRNYFQILSKEGMLHQAHSSGARLPTFKAFENYWHKSLRFEVLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCAVGYSVKMEKFLLELVGRSVKEVRLIAASVNALSLARQLERLEYSSAQITRFNLMGLKTLLNSPLFFDILEGKVLERFKKGLHFIEPDCMLV-----------TRPIEFQNERMQLLCVGKLECDYEGFFQTISKEE |
1VGP Chain:A ((71-181)) | ----------------------------------------------------------------------------------------------------------------------------------------------------ERYLPDFIIKFLREVRKDAQPMDILRTAVSLLGIE-DSKNDERTDIKGIKLISKFPTIV-----ANYARLRKGLDIIEPDPKLSHSENFLYMLYGDRPNEIKSKAMDVTLI--LHIDHEMNASTFASLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21917 for 563 contacts (-38.9/contact) +
2D Compatibility (PS) -10348 + (NN) -4264 + (LL) 12632
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -30247.0 ( -53.72 by residue)
QMean score : 0.176
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