Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFRINTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKAS--IGSTSSDKIGHVRMETSSFSGEGML---ASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLTNAINSVKDRTGVEASLDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ |
| 3K8V Chain:A ((44-239)) | -------------------------------------------DAAGLAISDRMTAQIKGLTQAQRNANDGISLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTASLGGSLTRTTSTIDATDLTKYDTAMAAGDLT--------INGVDVGKIDA---ASTAQERAAQLTEAINRVSSQTNVGASYDKTTGQVTLTSNAAIAVAGAANDATVAGWANNATTGTATTTTGINSLTVSSFTNAQQTITQIDNALKDINTARADLGAVQNRFTSTVANLQSMTENLSSARGRVTDADFASETANLSRAQILQQALEH---------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10812 for 1145 contacts (-9.4/contact) +
2D Compatibility (PS) -20455 + (NN) -2590 + (LL) 11248
1D Compatibility (HY) -8400 + (ID) 3700
Total energy: -34709.0 ( -30.31 by residue)
QMean score : 0.383
|
|
|