Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRNEVLLNGDINFKEVRCVGDNGEVYGIISSKEALKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGENHAKNED |
1I96 Chain:V ((1-84)) | ------------------------------------------------------------------------------------EVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNMLLAPVK--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 623404 for 3081 contacts (202.3/contact) +
2D Compatibility (PS) -7901 + (NN) 1584 + (LL) 7464
1D Compatibility (HY) -1600 + (ID) 650
Total energy: 622301.0 ( 201.98 by residue)
QMean score : ?
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