Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSMYYAFRDRKQKKREFRSLWVVRINAACRMHNTSYSRFMHALKVANIELDRKVLADMAMNDMQAFKSVLESVKEHL
3J3W Chain:Q ((3-117))-RVKGGTVTRKRRKKVLKLAKGYFGSKHTLYKVANQQVMKSGNYAFRDRRQKKRDFRKLWITRINAAARMNGLSYSRLMHGLKLSGIEVNRKMLADLAVNDLTAFNQLADAAKAQL


General information:
TITO was launched using:
RESULT:

Template: 3J3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13968 for 675 contacts (-20.7/contact) +
2D Compatibility (PS) -12479 + (NN) -5262 + (LL) 208
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -44551.0 ( -66.00 by residue)
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_3J3W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J3W-query.scw
PDB file : Tito_Scwrl_3J3W.pdb: