Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRTEVN----KRLEAMKEEERQ-KYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYREEGLDLHDCACEGPFHDHEKKGQKGKKPSHHKH
3G60 Chain:A ((878-931))
------------------------QALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSA
General information:
TITO was launched using:
RESULT:
Template:
3G60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 25460 for 249 contacts (102.2/contact) +
2D Compatibility (PS) -5371 + (NN) -3008 + (LL) 1888
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 14519.0 ( 58.31 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_3G60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G60-query.scw
PDB file :
Tito_Scwrl_3G60.pdb
: