Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQ--TCCG--------------QPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFEGHAEF--------NMVKDFCSRVYELSEFLDKKLQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKNLIRQLKNVELIELEKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVDVIVSADAGCLMNISTAMQKMGSLTKPMHFYDFLASRLGL |
| 2NZ6 Chain:A ((17-134)) | ----------------NLYFQSMKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLVGISQPKYAAELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKEYWPSKQAQDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMESPILVHSSAGVGRTGTFIAIDRLIYQIENENTVDVYGIVYDLRM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10669 for 468 contacts (22.8/contact) +
2D Compatibility (PS) -9672 + (NN) -522 + (LL) 1460
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -5915.0 ( -12.64 by residue)
QMean score : -0.158
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