Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKQILTILTPFFVATLLYFLGAPDGLNPNAWLYFCIFMGMIIGLILEPVPSGLIALSALVPCIALKIGASSEVASANKAISWGLSGYANKTVWLVFVAFILGLGYEKSLLGKRIALLLIRFLGQTPLGLGYAIGLSELCLAPFIPSNSARSGGILYPIVSSIPPLMGSTPSNNPDKIGAYLMWVALASTCITSSMFLTALAPNPLAMEIATKMGVNEISWFSWFLAFLPCGVVLILLVPLLAYKTCKPTLKGSKEVSLWAKKELESMGRFSLKEILMLSLTLLALLGWIFGKSLGLHASATALIVMVLMAFCKIVSYEDIIKNKSAFNIFLLLGSLLTMAGGLKNV-GFLNFIGNAAQNFLEHAHLDPLIAVLFIVALFYLSHYFFASITAHVSALFALFVGIGSHIQGVNLQELSLFLMLSLGIMGILTPYGTGPSTIYYGSGYIQSKDFWKWGFIFGFLYLIVFLSVCAPWVKFIAYRWL |
3QKI Chain:A ((306-380)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSIAFGYKNMRNFLNGCHDMDEHFL-HADLKENIPVLLALTSFYNSHFFDYKNVA-ILPYFQNLLKFSAHIQQLSMESNGKSVDRNNQPIHYNTCQVYFGEPGTNGQHSFYQLIHQGQVIPVELIGFKHSHFPIKFDKEVVSNHDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27235 for 331 contacts (-82.3/contact) +
2D Compatibility (PS) -7469 + (NN) 706 + (LL) 26912
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -16386.0 ( -49.50 by residue)
QMean score : -0.100
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