Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKEEGIMDTIKHGSKGMDYPAGEMPAIEMDEKDAKAIASYVMAELSSVKKTKNPQLIDKGKELFESMGCAGCHGNDG--------KGLQ-ENQVFAADLTTYGTESFLR-NILTHGKK---GNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 1W2L Chain:A ((5-96)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAELGARLYREKACFSCHSIDGSRLVGPSFKGLYGSTRTFEDGTTAVADENYLRESILQPGAKVVQGYPNVMPA-SYASLSEREVAALIEFIKQQQ---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17730 for 460 contacts (-38.5/contact) +
2D Compatibility (PS) -8708 + (NN) -3220 + (LL) 14368
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -22490.0 ( -48.89 by residue)
QMean score : 0.383
|
|
|