Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASGLFENDEIKNNKARDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKH------------ERLQQEITELQSKNVRLQKRLFELRELRPRD
2Y48 Chain:A ((287-338))
----------------------------------------------GQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEA
General information:
TITO was launched using:
RESULT:
Template:
2Y48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1972 for 142 contacts (13.9/contact) +
2D Compatibility (PS) -4535 + (NN) -3613 + (LL) 3060
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -7516.0 ( -52.93 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2Y48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y48-query.scw
PDB file :
Tito_Scwrl_2Y48.pdb
: