Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKMIGLVAVLSVLLARDNPFEPEINSKNLQGGFSGIYDDYLKEIHVDLPTSARILKKIT-LTYQDIDGSIHSKVVGIDKSIDWHYPLKLSQHTLNQDAFEKRYQIQDFDFLMANNTMILRSPYKILRSFVLVNPYRIVLDTQKGPLDIYQNMDLNQKFFSHIKVGTHKDYYRITLILDGKYRYLLEEKNGAYELKLK |
| 3C9P Chain:A ((59-118)) | --------------------------------------YGDFFRQAPYYVPERIAITGKICGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7446 for 342 contacts (-21.8/contact) +
2D Compatibility (PS) -5778 + (NN) 1239 + (LL) 9516
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -7269.0 ( -21.25 by residue)
QMean score : 0.180
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