Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKSWTKKWFLILFLMASCFGHLVATTGEKYFKMANQALKRGDYHRAVAFYKRSCNLRMGVGCTSLGSMYEYGDGVDQNISKAVFYYRRGCNLRNHLACASLGSMYEDGDGVQKDFPKAIYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALSFSKYACSLNYGISCNFVGYMYKSAKGVEKDLKKALANFKRGCHLKDGASCVSLGYLYEAGMDVKQNEEQALNLYKKGCSLKEGSGCHNVAVMYYTG-KGAPKDLEKATSYYKKGCALGFSGSCKVLEVIGKESDNLQDDAQNDTQDSVQ |
| 4BWR Chain:A ((71-303)) | ------------------------------------------DYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFRLGSEEEHKKAVEWFRKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108746 for 1971 contacts (-55.2/contact) +
2D Compatibility (PS) -23370 + (NN) -6250 + (LL) 3924
1D Compatibility (HY) -3200 + (ID) 3150
Total energy: -140792.0 ( -71.43 by residue)
QMean score : 0.271
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