Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGD-LANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKE-----------ELSCKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLID----KIEKMLLIDEDKKSPIHVSSSNYIIEADFELFAIALKNMIDNAIKYSDDK---QVFLDFIGNNLVVSNKSKPL-KEDFEKYLQPYFKS-SNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
4BIX Chain:A ((61-270)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDL-LVMSRNQQKNALVSETIKANQ---LWSEVLDNAAFEAEQM-----GKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD-------GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45183 for 1077 contacts (-42.0/contact) +
2D Compatibility (PS) -18992 + (NN) -7425 + (LL) 19788
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -66162.0 ( -61.43 by residue)
QMean score : 0.382
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