Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEMELKLIKIDTSHYFEKKPGLGERMDYAGRCYYNKFQRVNAMLTSSLIQKHLKREIEIAHNLILRNDKVENIVFDYNGRNPERFYHKAQLLLREEGFMNFTAYNTKTPGHLHLYVHKGHTELGEGERLIKTLSMKLAQGLPKEWRVFPSNEWPKEFNILALPYEVFAKERGSSWAKHL
2ATZ Chain:A ((3-178))
--EMELKLIKIDTSHYFEKKPGLGERVDYAGRCFYNKFQRVNAMLTSSLIQKHLKREIEIAHNLILRNDKVENIVFDYNGRNPERFYHKAQLLLREEGFMNFTAYNTKTPGHLHLYVHKGHTELGEGERLVKTLSMKLAQGLPKEWKVFPSNEWPKEFNILALPYEVFAKERGSSWAK--
General information:
TITO was launched using:
RESULT:
Template:
2ATZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65843 for 1259 contacts (-52.3/contact) +
2D Compatibility (PS) -18521 + (NN) -4518 + (LL) 480
1D Compatibility (HY) -24800 + (ID) 8600
Total energy: -121802.0 ( -96.75 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_2ATZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ATZ-query.scw
PDB file :
Tito_Scwrl_2ATZ.pdb
: