Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVTIERMESRINRLSAKIDALLEQQKKVISLLETYLSVYSTPQEASNKLFKGISQGMELA---PEIAQED---EEKRLYVLQYLSHVDITKNKQDSQLKKDCLEFIQRFNIPKPIIVTALYNLKGIKPTKKEVAKQLQKLYVWERRYQQGGIDALKDRRGRPLKKP |
3K00 Chain:A ((318-385)) | ---------------SAKVQ---QQTTEKLSLLPTRTSVYEVPSVADNEMVKFFKPAVDKAVERPWIAEGNALFEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDYK--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16027 for 312 contacts (51.4/contact) +
2D Compatibility (PS) -6480 + (NN) -2999 + (LL) 6896
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: 8644.0 ( 27.71 by residue)
QMean score : -0.003
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