Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFDNTLINLFETAPLLTSLLAGILTFLSPCVLPLIPAYMSYISQISLEDIKDGKAKRVSVFLKSLMFVVGFSLVFLGVGMSMAKLIHSFSFSWVNYIAGGIVILFGLHFLGVFRFAFLYKTQSVGLASKSNSMQRFYPFLLGMSFALGWTPCIGPIFTSIVIMSASKDAYGLMLMVVFVMGLAIPFLLVALMLERALLFLKSLRKYNRAIEIVSGLVLILMGILIMTNSLESLTNFLQN |
| 1V54 Chain:L ((26-39)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLFFGSGFAAPFFIVRHQLLKK------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6083 for 47 contacts (-129.4/contact) +
2D Compatibility (PS) -1261 + (NN) -327 + (LL) 18820
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 9699.0 ( 206.36 by residue)
QMean score : 0.035
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