Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISNISIHPKTMFKNALNIQDFSFKNHTSTAIIGTNGAGKSTLINTILGIRSDYNFKAQNNNIPY---HDNVIPQRKQLGVVSNLFNYPPG-LNANDLFKFYQFFHKNCTL--DLFEK---NLLNKT-YEHLSD--------GQKQRLKIDLALSHHPQLVIMDEPETSLEQNALIRLSN-LISLRNTQQLTSIIATHD-PIVLDSCEWVLLLKNGN-IAQYKPLNSIL-KSVAKTFNFKEKPTTKDLLALLKDI
3GFO Chain:A ((22-254))--------------HALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIV---FQDPDNQLFSASVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVIRKVNLR-LPRIGHLMEI----


General information:
TITO was launched using:
RESULT:

Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68212 for 1489 contacts (-45.8/contact) +
2D Compatibility (PS) -22706 + (NN) -16051 + (LL) 1648
1D Compatibility (HY) -16400 + (ID) 3500
Total energy: -125221.0 ( -84.10 by residue)
QMean score : 0.393

(partial model without unconserved sides chains):
PDB file : Tito_3GFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFO-query.scw
PDB file : Tito_Scwrl_3GFO.pdb: