Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNDFNLLILSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHN--HYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHYPNACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCLESFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL
1ZNW Chain:A ((22-199))
-----RVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLV-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZNW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75810 for 1261 contacts (-60.1/contact) +
2D Compatibility (PS) -19586 + (NN) -10687 + (LL) 2324
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -120109.0 ( -95.25 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_1ZNW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZNW-query.scw
PDB file :
Tito_Scwrl_1ZNW.pdb
: