Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKKCRHLLQTSDLSLDEIKLLLNKASVYANDFNAVSLETREKMQDKIIVALFFENSTRTVSSFEIASLRLGAKIVKLNMQTSSTSKGETLIDTFKNIHAMQPDAIITRHAFSSAPFKLAEFSQCPLINAGSGTSAHPTQALLDLLTLYRHFGSLENLKGKKIAFIGDVKNSRVANSNIKLLQRLGLEIMLCAPSSML-PITPLKTTHNIEEAIGFADILMSLRTQTERHNAPIFASLKDYGNAYCITQKRLETHAKNKEVIILHPGPVHRDIDIESAVLEDKRSKVLEQVKNGVAMRMAVLEFLLLD |
3R7D Chain:A ((2-286)) | -----KHLTTMSELSTEEIKDLLQTAQELK------SGKTDNQLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNT---FKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAV--SQEGYLNKYGLTVERAERMKRH--AIIMHPAPVNRGVEIDDSLVESEKSRIFKQMKNGVFIRMAVIQRALQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163552 for 2379 contacts (-68.7/contact) +
2D Compatibility (PS) -30821 + (NN) -14388 + (LL) 1128
1D Compatibility (HY) -20000 + (ID) 5550
Total energy: -233183.0 ( -98.02 by residue)
QMean score : 0.488
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