Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
2C4V Chain:A ((1-156))
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNN------------
General information:
TITO was launched using:
RESULT:
Template:
2C4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123951 for 1213 contacts (-102.2/contact) +
2D Compatibility (PS) -17528 + (NN) -6900 + (LL) -856
1D Compatibility (HY) -24400 + (ID) 7800
Total energy: -181435.0 ( -149.58 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_2C4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C4V-query.scw
PDB file :
Tito_Scwrl_2C4V.pdb
: