Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTH--KNILHALKGEAKLQEIICEIEPGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 4V03 Chain:A ((3-158)) | ---------------------------EVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAD---RNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLP--------VIDIEKWNKTVEEIKNSGNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLLESMDKRNYKVIVNRIKWEMVKRGAMLSVEDIVDILKAEIIGIIPEEPKLVDFTNRGEPIVLDEKFPASQAIIDTARRLMGESIPLKR----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83748 for 1137 contacts (-73.7/contact) +
2D Compatibility (PS) -15687 + (NN) -5216 + (LL) 2916
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -115185.0 ( -101.31 by residue)
QMean score : 0.515
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