Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSNHMKNKTLVISGATRGIGKAILYRFAQSGVNIAFTYNKNVEEANKIIEDVEQKYSIKAKAYPLNVLEPEQYTELFKQVDADFDRVDFFISNAIIYGRSVVGGFAPFMRLKPKGLNNIYTATVLAFVVGAQEAAKRMQKIGGGAIVSLSSTGNLVYMPNYAGHGNSKNAVETMVKYAAVDLGEFNIRVNAVSGGPIDTDALKAFPDYVEIKEKVEEQSPLKRMGNPNDLAGAAYFLCDETQSGWLTGQTIVVDGGTTFK |
| 3OID Chain:A ((3-248)) | -------QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE-KLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNA------ASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVS-SKADMIRGQTIIVDGGRSLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123641 for 2167 contacts (-57.1/contact) +
2D Compatibility (PS) -26801 + (NN) -9860 + (LL) 724
1D Compatibility (HY) -16400 + (ID) 4900
Total energy: -180878.0 ( -83.47 by residue)
QMean score : 0.610
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