Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSNALSVGEIAHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDFCRNHLGKNKLNRYANKSLKSAHNHQELILKYLEMLENSSDLENLGSYYEKELSNTTRNLEGIYYTPNRIVEQLFTLPKDFDTTQAIFCDPAVGSGNFVMHALKLGFKVENIYGYDTDAFAVALTKKRIKERYRLDCPNIMQ---KDFLSLKHAPQFDCIFTNPPWG-----KKYN----QNQKENFKQQFNLHQS-LDSASLFFMASLNCLKENAYLGLLLPESCLNIDAFSKMREMALKFQMRSLIDFDKPFKNLMTKAVGLALKKTHNKDQKISCFYQNSEFKRSPSSFFNNPKKIFNIHCSHQKNKILDHLFSLPHITLKNNAHFALGIVTGNNKEKLHPKQEKNTIPIFRGSDILKDRLKAPSQFINADLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFLNSANMFVLKENFPINAHALKELLNSDLMQFIFESLFKTHKILRKDLECLPLFAQFINNSFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG |
| 1G38 Chain:A ((57-191)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDLPPWAEGILADFLLWEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLPKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRMLERLPVRREYGFHT-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63525 for 787 contacts (-80.7/contact) +
2D Compatibility (PS) -12796 + (NN) -2056 + (LL) 13812
1D Compatibility (HY) -11600 + (ID) 1600
Total energy: -77765.0 ( -98.81 by residue)
QMean score : 0.446
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