Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCHNLP-----RVPIDILLGGPPCQSYSTLGKRKMDEKAN-LFKEYLRILDLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFK----QKFYFPKPIKTHFSLKDALGDLPPIQSG---ENGDALGYLKNA------DNVFLEFVRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYINTYAKMWWEKPAPTITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYGSANAKRLQIGNAVPPLLSAALAHAVFDFLRGKNV |
| 3G7U Chain:A ((5-367)) | ---VIDLFSGVGGLSLG-AARAGFDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQGFS-------DDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAFNLVSGDYDILDPIKVKASDYGAPTIRTRYFFIGVKKSLKLDISDEVFMPKMIDP-VTVKDALYGLPDIIDANWQSDSESWRTIKKDRKGGFYEKLWGQIPRNVGDTESIAKLKNN-IISGCTGTLHSKIVQERYASLSFGETDKISRSTRLDPNGFCPTL---------VRPIHPYHPRVITPREAARLQGFPDWFRFHVTKWHSFRQIGNSVSPIVAEYILKGLYNLLNE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110528 for 2793 contacts (-39.6/contact) +
2D Compatibility (PS) -33473 + (NN) -3750 + (LL) 1160
1D Compatibility (HY) -18800 + (ID) 4800
Total energy: -170191.0 ( -60.93 by residue)
QMean score : 0.373
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