Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKFSKLGFILATLGSSIGLGHIWRFPYMVGHNGGSAFVLLYLALTLSLGIAMLLVEMLIGNLGKKDVVSNYQILDPKRKKYYPFTSFFILG---GPLILSFYAVVLGWVLYYLF-VVTFDLPKDLEQAKMQFSMLQNGSLIWPVIGFSACLLPTIWFVSRGIEKGIEKLNVVLMPLLFVIFIGLLIYAMTLESMPKALRFLFNFEIQKI-DFKVVMDALGQMFFSLSLGVGTIITYSAFTPKKENLLKSSLFIVLPGILISLIAGVMIFTFVFEYHADVSQGPGLVFISLPLTFAKMGISGQIVSLFFFMALVFAGITSTVSLIEPLALYLINRFNFSRLKASLWIGVVVYVLGVLVILSMNERYAKFLSFAHKSVFGWLDFITSSFLMPLGGLFSVLFIGWILNKKRSFLATKHFFSANAFKAWHFSVRFIAPVVILAIFILQFK |
| 4US4 Chain:A ((19-451)) | -------GFILAAMGSAVGLGNIWRFSYVTGENGGAAFLLVYLGFIALIGIPIVLAEFTIGRRAQSDAVGSFEKLAPGK----PWKVAGLMGVAAGFLILSFYGVIAGWILFYLFNYITGQLWSAPAEGFGGFFEGFIANPTLPLFWQALFMIATIWIVAIGVKKGIERSNKILMPLLGVLLIALAIYSLTLGGAKEGLAFLFSPDWSALKDPGVYLAAISQAFFTLSLGMGALITYGSYVSKDSRLPGAAVSVAGLDTAFAIIAGIMIFPAVFALGLSPSGGPGLVFVVLPDIFDSIRL-GPIVGIAFFILLGAAALSSAVSLLEVPVAYFMRKFDWSRKQAAITLGVIITLLGIPSSLSFGV-LGEVTIIPGLNIFDSVDFIASSVFLPLGGMIIALFIGWGW-KTSDALAESDLTDSVWGKLWILSLRFIAPIAILIVFLSAFQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4US4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -546999 for 3980 contacts (-137.4/contact) +
2D Compatibility (PS) -43763 + (NN) -13871 + (LL) 748
1D Compatibility (HY) -47600 + (ID) 8350
Total energy: -659835.0 ( -165.79 by residue)
QMean score : 0.383
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