Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDCAYKLLKKHVGIENYTLLDTACGNKEFLKLHHPKK------IGADIDPKCDALIINALANPKRENYGISQD----EPL----IIVGNPPYNDRTSFIKQDIKNKDFIFEIDNDLKSR---------DLGISFL-KSFAILKPAFICV-LHPLSYLIKEANFKQLKLFKDHYRLLDAFVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
2IBT Chain:A ((21-180)) | ------------------VETPPEVVDFMVSLAEAPRGGR---VLEPACAHGPFLRAFREAHGTAYRFVGVEIDPK--ALDLPPWAE------GILADFLLWEPGEAFDLILGNPPYG----IVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE-DFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWRE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39719 for 887 contacts (-44.8/contact) +
2D Compatibility (PS) -13822 + (NN) -1878 + (LL) 1656
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -67013.0 ( -75.55 by residue)
QMean score : 0.340
|
|
|