Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGYESQIIFLDTPGLHHQEK-LLNQCMLSQALKAMGDAELRVFLASVHDDLKGYEEFLSLCQK---PHILALSKIDTATHKQVLQKLQEYQKYSSQFLALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIEEERID-KVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD |
| 1X1L Chain:X ((5-295)) | -KSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRH---RIVGIHTEGAY--QAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1X1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4246903 for 35245 contacts (120.5/contact) +
2D Compatibility (PS) -25529 + (NN) 12048 + (LL) 1644
1D Compatibility (HY) 9600 + (ID) 750
Total energy: 4243916.0 ( 120.41 by residue)
QMean score : ?
|
|
|