Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRKLATSVSLISLLISNALYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPDNKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKNKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLRVPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYA-NDVICRPNDE------VCSPLRDEMVAMPTNDSVTQKPNI-----IAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANEEEREKKLLAEKEKQETELAKYKLKDLENQKKLKALEAELKKKNTKKPRVVEVPIPPKTSDSDETMRVIKEKENYNGLLVDKETTIKRSYKGTLISENSYSKKTPINLEDLRSLEEEIKSYYVKSNGLCYANGINLYVKIKNDPYKEGMLCGYESVQKLLSPLRDKLKYDKQKLQKALLKDLK |
| 3C9F Chain:A ((414-550)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------TKVAAKLN---DYISASRLKPPHQYDLQVQ----------------QEKLPKGYVTHDDFGADGDDTLHRAVVNFPVPNVIQSVEINDEVDSPVNLVFYSFITPNIIWALKELNFSTEQVPTPYS-----DIYLGTLLNEFVANNE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4732 for 474 contacts (10.0/contact) +
2D Compatibility (PS) -11743 + (NN) -9521 + (LL) 25732
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: 3150.0 ( 6.65 by residue)
QMean score : 0.276
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