Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLVKNTIYSFLLLSVLMAEDITSGLKQLDNTYQETNQQVLKNLDEIFSTTSPSANNKIGQEDALNIKKAAIALRGDLALLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQKTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIKKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK |
4CII Chain:A ((41-217)) | ------------------------------------------------------------GEEDALNIKKAAIALRGDLALLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQNTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSLKAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6541 for 929 contacts (-7.0/contact) +
2D Compatibility (PS) -19789 + (NN) -16107 + (LL) 4416
1D Compatibility (HY) -25200 + (ID) 8700
Total energy: -71921.0 ( -77.42 by residue)
QMean score : 0.506
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