Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIIYLILFLIVIYLLYRILDVLEQK
1PP9 Chain:D ((208-225))
-MLLMMGLLLPLVYAMKRHKWSVLKS
General information:
TITO was launched using:
RESULT:
Template:
1PP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12077 for 64 contacts (-188.7/contact) +
2D Compatibility (PS) -1957 + (NN) -1637 + (LL) 208
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -18063.0 ( -282.23 by residue)
QMean score : 0.834
(partial model without unconserved sides chains):
PDB file :
Tito_1PP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PP9-query.scw
PDB file :
Tito_Scwrl_1PP9.pdb
: