Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKY---FIFLDENHYFYLIEESNMHSKYFAQIKEKKLPPLILTHN----GLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNRANALDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFCFSYVEEPN--KQEFLDFK-------QKYLDFSRTKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIEN-EVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPKTPKIQVKNSYLLQIQKNK |
1E4E Chain:A ((4-311)) | IKVAILFGGCSEEHDVSVKSAIEIAANI-NKEKYEPLYIGITKSGVWKMCE------KPCAEWENENCYSAVLSPDKKMHGLLVKKNHEYEINHVDVAFSALHGKSGEDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDDRPVAAT---FTYPVFVKPARSGSSFGVKKVNSADELDYAIESARQYDSKILIEQAVSGCE----VGCAVLGNSAALVVGEVDQIRLQYGIFRIHQEVEPEKGSENAVITVP-ADLSAEERGRIQETVKKIYKTLGCRGLARVDMFLQDNGRIVLNEVNTLPGFTSYSRYPRMMAAAGISLPELIDRLIVLALK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148315 for 2323 contacts (-63.8/contact) +
2D Compatibility (PS) -31774 + (NN) -12244 + (LL) 1440
1D Compatibility (HY) -20800 + (ID) 4500
Total energy: -216193.0 ( -93.07 by residue)
QMean score : 0.447
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