Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGLFVAPVLAILGAISADEMEKKRDDAKAYYSQVEVAVKKADVVIDNLQAVKKMADLFTRQITKFDALFFLLSQDAIATMKKHHYDTSRYNQKEKDQLCVTVSTLFSLSAFLKAPIMDKHQKLNKKAQKALNLMRDQMDSLENGNYSLDGIRFRQAQLKDLRDDKTS |
3VUO Chain:A ((330-424)) | --------------------------------------------------------DIWNLNLNYFSKEFNSIIPDRFSNALKHFYRKQYYTMDYGDNY--NINGFVNGQINTKLPLSDKNTNIISKPEKVVNLVNANNISLMKSNIYGDGLKGTTEDFYSTYKIPYN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10632 for 445 contacts (23.9/contact) +
2D Compatibility (PS) -9045 + (NN) 7293 + (LL) 5684
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: 9064.0 ( 20.37 by residue)
QMean score : 0.006
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