Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYQKIYTHKVVFSSLFFLLFLFNVETLLFSHFSDDFSQLFFLFENHVYDFIIKLDYLGLIGVSSIYLLALILKPFTLTRQKCACIGILCLSFYAWNFPIKNSSIALYVFYFALLGTLLWRFLGASMKQSFLPSMNICVVWVFASSLQSFRFLSVSDCVDFSLFILALFLLILVLIYHKRLFGLYEYANTLILIVGLCVVVLCSSMFIQTKEYYGMRLGFYFLGLLGWLLEYIHNTLRRLEHKI |
| 1HPI Chain:A ((62-69)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGWCTAWVAR--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -438 for 16 contacts (-27.4/contact) +
2D Compatibility (PS) -692 + (NN) 1548 + (LL) 22276
1D Compatibility (HY) -800 + (ID) 100
Total energy: 21794.0 ( 1362.12 by residue)
QMean score : -0.240
|
|
|