Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILDQKHT--EVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDL-------KHGILHQTLHPKAVKEDLASEIVARYYDN----------------DQAFKAKEQFSKVFSANL---LPEILLE-SDFDEG-VGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRF-VKGNYVIQLGKKRFMKLNIN |
1H3E Chain:A ((11-431)) | -------ALALLKRGAEEIVP---EEELLAKLKEGRP-LTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFTGMIGDPSGRSKTRPPLTLEETRENAKTYVAQAGKILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEAGIPISLHELLYPFAQAYDSVAIRADVEMGGTDQRFNLLVGREVQRAYG-QSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTEPPEAMFKKLMRVPDPLLPSYFRLLTDLEEEEIEALLKAGPVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGYAWEAFGRDKEAGPEEVRRAEARYDEVAKGGIPEEIPEVTIPASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLSRPRILQRGKDRFVRVRLS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172152 for 3137 contacts (-54.9/contact) +
2D Compatibility (PS) -41275 + (NN) -10579 + (LL) 1512
1D Compatibility (HY) -35600 + (ID) 8750
Total energy: -266844.0 ( -85.06 by residue)
QMean score : 0.504
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